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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015876159.1_cds_XP_016436026.1_31928
CDS Infomation

[gene=LOC107762202] [db_xref=GeneID:107762202] [protein=beta-amyrin synthase] [protein_id=XP_016436026.1] [location=join(1589..1789,3459..3644,3758..3847,4034..4231,4757..4841,4984..5150,5231..5419,5515..5628,5800..5919,6025..6147,6256..6354,6449..6505,6675..6721,6807..6950,7543..7720,7956..8036,8138..8221,8812..8934)] [gbkey=CDS]
Sequence

ATGTGGAAGTTGAAGATTGCAGAAGGACAAGATGGACCATATTTGTACAGCACAAACAAC
TACGTAGGACGTCAAACGTGGGAGTTCGATCCAAATGCAGGAACACAAGAAGAACGAAAG
GAGATCGAAGAGGCTCGTCAACAATTTTGGAATAATCGGTATAAAGTAAAGCCAAGTGGA
GATCTTCTTTGGCGAATGCAGTTTCTTCGAGACAAGAATTTCAAACAAACAATTCCAGCA
GTAAAAGTAGAAGAAGGGGAAGAAATTAGCCATGAAGTTGCCACAGCCGCACTTCGTAGA
GCTGTTCATTTCTTTTCAGCATTACAGGCTAGTGATGGTCATTGGCCTGCTGAAAATGCT
GGTCCTTTATTCTTTCTTCCACCTTTGGTTATGTGTATGTATATCACCGGTCATCTTAAT
ACTGTATTCCCAGCAGAACATCGGAAGGAAATTCTTCGGTATATATACTGTCACCAGAAT
GAAGATGGTGGGTGGGGTTTGCACATAGAAGGTCATAGTACCATGTTCTGTACATCACTG
AGTTACATATGCATGAGGATCCTTGGCGAAGGACCGGATGGTGGTGAAAACAATGCCTGT
GCTAGAGCAAGGAAATGGATTCTTGATCATGGTAGTGTCACCGCGATTCCTTCGTGGGGT
AAAACATGGCTCTCGATTCTTGGAGTTTTTGAGTGGTTAGGAACCAACCCAATGCCCCCT
GAGTTTTGGATTCTTCCATCTTTTCTTCCCGTGCATCCAGCAAAAATGTGGTGTTACTGT
CGAATGGTCTACATGCCAATGTCTTATCTATATGGGAAGAGGTTTGTTGGTTCAATCACA
CCTCTTATTTTACAACTGAGGGAAGAGTTATATGATCAACCATATGATGAAATTAATTGG
AGAAAAGTACGCCATGTATGTGCTAAGGAGGATCTCTACTACCCTCATCCCTTGGTTCAA
GATTTGATGTGGGACAGTCTCTACATATGTACCGAGCCTTTATTGACTCGCTGGCCTGTC
AACAAGCTGAGAAATAAAGCTCTTGAAGTTACCATGAAACACATACACTATGAAGATGAG
AATAGTAGATACATCACCATTGGATGTGTCGAAAAAGTATTGTGCATGCTTGCTTGTTGG
GTTGAGGATCCCAACGGCGATTATTTCAAAAAACATCTTGCTAGAATCCCAGATTATTTA
TGGGTAGCTGAAGATGGAATGAAAATGCAGAGTTTTGGTAGTCAAGAATGGGATACTGGT
TTTGCTATTCAAGCTCTATTAGCCAGTGAGATGAATGATGAGATAGCAGACACTCTTAAA
AGAGGACACAACTTTATAAAAGAATCACAGGTGAAGGAGAATCCTTCTGGTGATTTTAAA
TCAATGTATCGGCATATTTCAAAAGGATCGTGGACATTTTCAGATCAAGATCATGGATGG
CAAGTCTCTGATTGCACTGCCGAAGCACTAAAGTGCTGCCTTCTCTTCTCTACAATGCCC
CCTGAATTAGTTGGTGAGGCAATGGAACCTCGGCGACTGTATGACTCGGTGAATGTTATT
CTTTCCTTACAGAGTAAAAATGGAGGCTTAGCAGCGTGGGAGCCTGCGGGGGCCTCAGAG
TATTTGGAGTTGCTCAATCCTACTGAATTTTTCGCGGACATTGTGATTGAGCACGAGTAC
GTCGAGTGTACTGCCTCATCAATTCAAGCTCTTGTTCTGTTTAAGAAGCTGTACCCTGGA
CACCGAACAAAAGAGATAGACAATTTCATTGCTAATGCTGTTAAATATCTTGAAGATGTA
CAGATGCCTGATGGTTCATGGTATGGTAACTGGGGTGTGTGCTTCACATATGGTTCATGG
TTTGCTCTTGGAGGACTTGCTGCAGCAGGCAAGAGTTACAGCAACTGTGCAGCTGTTCGT
AAAGGCGTTGAATTTCTGTTACAAACACAAAGGTCTGATGGTGGTTGGGGCGAAAGCTAC
CGTTCTTGCCCAGACAAGGTATATAGAGAACTTGAAACAGATAACTCAAATCTTGTACAA
ACTGCATGGGCATTGATGGGATTGATTCACTCTGGCCAGGTTGGCAGAGATCCAAGGCCC
CTCCACCACGCAGCAAGGCTGTTGATTAATTCTCAAATGGAAGATGGTGACTTCCCACAG
CAGGAAATTACTGGTGTTTTCATGAAGAATTGCATGTTACACTATGCAGCATACAGAAAT
ATATATCCATTATGGGGTTTGGCTGAATACCGCAAAAATGTCCTATCACCGTTACAAAAC
AACTAA

Peptide Sequence

PEP ID

XP_016436026.1
PEP Infomation

PREDICTED: beta-amyrin synthase [Nicotiana tabacum]
Sequence

MWKLKIAEGQDGPYLYSTNNYVGRQTWEFDPNAGTQEERKEIEEARQQFWNNRYKVKPSG
DLLWRMQFLRDKNFKQTIPAVKVEEGEEISHEVATAALRRAVHFFSALQASDGHWPAENA
GPLFFLPPLVMCMYITGHLNTVFPAEHRKEILRYIYCHQNEDGGWGLHIEGHSTMFCTSL
SYICMRILGEGPDGGENNACARARKWILDHGSVTAIPSWGKTWLSILGVFEWLGTNPMPP
EFWILPSFLPVHPAKMWCYCRMVYMPMSYLYGKRFVGSITPLILQLREELYDQPYDEINW
RKVRHVCAKEDLYYPHPLVQDLMWDSLYICTEPLLTRWPVNKLRNKALEVTMKHIHYEDE
NSRYITIGCVEKVLCMLACWVEDPNGDYFKKHLARIPDYLWVAEDGMKMQSFGSQEWDTG
FAIQALLASEMNDEIADTLKRGHNFIKESQVKENPSGDFKSMYRHISKGSWTFSDQDHGW
QVSDCTAEALKCCLLFSTMPPELVGEAMEPRRLYDSVNVILSLQSKNGGLAAWEPAGASE
YLELLNPTEFFADIVIEHEYVECTASSIQALVLFKKLYPGHRTKEIDNFIANAVKYLEDV
QMPDGSWYGNWGVCFTYGSWFALGGLAAAGKSYSNCAAVRKGVEFLLQTQRSDGGWGESY
RSCPDKVYRELETDNSNLVQTAWALMGLIHSGQVGRDPRPLHHAARLLINSQMEDGDFPQ
QEITGVFMKNCMLHYAAYRNIYPLWGLAEYRKNVLSPLQNN

Transcript Sequence

Gene sequence data has not been registered.